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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs17078781 chr5:176544228 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.93 1.18E-22 Box Plot
THYM rs17101862 chr1:79010670 G/T GAGE12J chrX:49178536-49185863:+ 0.71 7.71 1.23E-11 Box Plot
THYM rs17153901 chr7:26586153 A/G GAGE12J chrX:49178536-49185863:+ -1.08 -7.87 5.58E-12 Box Plot
THYM rs17713923 chr16:79076654 C/A UMOD chr16:20344374-20367623:- 1.06 7.53 2.98E-11 Box Plot
THYM rs17814011 chr12:77217193 C/T LIPT1 chr2:99771418-99779620:+ 0.95 7.14 1.84E-10 Box Plot
THYM rs1801247 chr13:52520471 C/T CUL7 chr6:43005355-43021683:- 1.14 7.22 1.31E-10 Box Plot
THYM rs182619 chr5:169759059 A/T GRLF1 chr19:47421933-47508323:+ 0.65 7.86 6.04E-12 Box Plot
THYM rs1837471 chr12:74216821 C/G GAGE12D chrX:49306370-49313697:+ 0.47 7.37 6.19E-11 Box Plot
THYM rs199436 chr17:44789285 C/T LOC644172 chr17:43677491-43679748:- -0.84 -8.67 1.13E-13 Box Plot
THYM rs199436 chr17:44789285 C/T LRRC37A4 chr17:43578685-43595516:- 0.45 7.54 2.71E-11 Box Plot
THYM rs199437 chr17:44786336 T/A LOC644172 chr17:43677491-43679748:- 0.83 8.5 2.64E-13 Box Plot
THYM rs199437 chr17:44786336 T/A LRRC37A4 chr17:43578685-43595516:- -0.46 -7.55 2.61E-11 Box Plot
THYM rs199438 chr17:44791643 G/A LOC644172 chr17:43677491-43679748:- 0.83 8.5 2.64E-13 Box Plot
THYM rs199438 chr17:44791643 G/A LRRC37A4 chr17:43578685-43595516:- -0.46 -7.55 2.61E-11 Box Plot
THYM rs199439 chr17:44793503 A/G LOC644172 chr17:43677491-43679748:- 1.1 11.49 1.14E-19 Box Plot